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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CAH12_RABIT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGSLRAAA VLLLGIAQLP PSSAAPRNGS KWTYVGADGE RSWFKKYPSC GGRLQSPIDL  60
   61 HGDTLQYDAS LTPLEFQGYN VSADKQFNLT NDGHSVRLNL PPDMYLQGLP SRYTATQLHL 120
  121 HWGNRNDPYG SEHTVGGKQF AAELHIVHYN SDSYPDISTA SNKSEGLAVL AVLIEKGYFN 180
  181 PYYDRIFSFL RYVKYKGQNV RIPTFNIEEL LPEKPAEYYR YRGSLTTPPC YPSVLWTVFR 240
  241 NPVTISQEQL LALQTALYFT RADDPAPREM INNFRPIQNF GVRLVHASFQ EVQILPGTGL 300
  301 SVGIILSVAL AGVLGICIVL AVCIWFFRRK KGSKKGDNKG VIYNPAIKME TEAHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle