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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CO6A2_CHICK
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRTAEMFQ QAFLSTLLCV ALVPLHAQFD DEPVTSCTEK TDCPISVYFV IDTSESIALQ  60
   61 TVPIQSLVDQ IKQFIPRFIE KLENEVYQNQ VSITWMFGGL HYSDVVEIYS PLTRSKDTYL 120
  121 TKLRAIRYLG RGTFTDCAIS NMTQQFQSQT ARDVKFAVVI TDGHVTGSPC GGMKMQAERA 180
  181 RDMGIKLFAV APSEDVYEQG LREIASPPHD LYRSNYTITP KDALHIDENT IERIIKAMKH 240
  241 EAYAECYKMT CLEIAGPAGP KGYRGQKGAK GNMGEPGSPG LKGRQGDPGI EGPIGYPGPK 300
  301 GVPGLKGEKG EIGSDGRRGA AGLAGRNGTD GQKGKLGRIG PPGCKGDRGD KGPDGYPGDA 360
  361 GDQGERGDEG MKGDPGRPGR SGPPGPPGEK GSPGIPGNPG AQGPGGTKGR KGETGPPGPK 420
  421 GEPGRRGDPG TKGSKGGPGA KGERGDPGPE GPRGLPGEVG NKGARGDQGL PGPRGPTGAV 480
  481 GEPGNIGSRG DPGDLGPRGD AGPPGPKGDR GRPGFSYPGP RGPQGDKGEK GQPGPKGGRG 540
  541 ELGPKGTQGT KGEKGEPGDP GPRGEPGTRG PPGEAGPEGT PGPPGDPGLT DCDVMTYVRE 600
  601 TCGCCDCEKR CGALDIMFVI DSSESIGYTN FTLEKNFVVN VVSRLGSIAK DPKSETGARV 660
  661 GVVQYSHEGT FEAIKLDDER INSLSSFKEA VKRLEWIAGG TWTPSALQFA YNKLIKESRR 720
  721 EKAQVFAVVI TDGRYDPRDD DKNLGALCGR DVLVNTIGIG DIFDQPEQSE TLVSIACNEP 780
  781 QRVQKMRLFS DLVAEEFIDK MEDMLCPDPQ IVCPELPCQT ELAVAQCTQR PVDIVFLLDG 840
  841 SERIGEQNFH RAHHFVEQVA QQLTLARRND DNMNARIALL QYGSEREQNV VFPLTYNLTE 900
  901 ISNALAQIKY LDSSSNIGSA IIHAINNIVL SPGNGQRVAR RNAELSFVFI TDGITGSKNL 960
  961 EEAINSMKKQ DVMPTVVALG SDVDMDVLLK LGLGDRAAIF REKDYESLSQ PSFFDRFIRW1020
 1021 IC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle