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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CO6A1_CHICK
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHDSFLAL LLLLGGAWAQ QAEINARVLR AQDCPVDLFF VLDTSESVAL RVKPFGDLVA  60
   61 QVKDFTNRFI DKLTERYFRC DRFLAWNAGA LHYSDSVVII KDLTAMPSGR AELKNSVSAI 120
  121 NYIGKGTHTD CAIKQGIERL LLGGSHLKEN KYLIVVTDGH PLEGYKEPCG GLDDAANEAK 180
  181 HLGIKVFSVA ISPHHLDQRL NIIATDHAYR RNFTATSLKP TRDLDVEETI NNIIEMIKDN 240
  241 MEQSCCSFEC HPPRGPPGPP GDPGHEGERG KPGLPGQKGD AGDPGRPGDM GPVGYQGMKG 300
  301 DKGSRGEKGS RGAKGAKGEK GKRGIDGIDG MKGEAGYPGL PGCKGSPGFD GTQGPPGPKG 360
  361 DPGAYGPKGG KGEPGEDGKP GRQGIPGSPG EKGAPGNRGE PGPLGETGDE GSPGADGPPG 420
  421 ERGSNGERGP PGSPGDRGPR GDLGEPGPPG DQGREGPLGP PGDQGEPGPP GPKGYRGDDG 480
  481 PRGNEGPKGS PGAPGLPGDP GLMGERGEDG PPGNGTIGFP GAPGQQGDRG DPGINGTKGY 540
  541 VGPKGDEGEA GDPGNDNPTA GPSGIKGAKG HRGPEGRPGP PGPVGPPGPD ECEILDIIMK 600
  601 MCSCCECTCG PVDLLFVLDS SESIGLQNFQ IAKDFIIKVI DRLSKDERVK FEPGESRVGV 660
  661 VQYSHNNTQE LVAMGDANID NIGALKQAVK NLKWIAGGTH TGEALQFSKE NLLRRFTSNN 720
  721 NVAIVITDGR SDTLRDRTPL TSLCEVTPVV SLGIGDIFRN NPNPDQLNDI ACLGMPRRQG 780
  781 LSIQRDNYAE LLDDSFLQNI TSYVCREKKC PDYTCPITFA NPADIMLLVD SSTSVGSKNF 840
  841 DTTKNFVKRL AERFLEASKP AEDSVRVSVV QYSGRNQQKV EVPFQRNYTV IAKAVDNMEF 900
  901 MNEATDVNAA LQYIMGLYQR SSRSGAKKKV LVFSDGNSQG ITARAIERTV QEVQQAGIEV 960
  961 YVLAVGSQVN EPNVRVLVTG KSTNYDVAYG ERHLFRVPDY TSLLRGVFYQ TVSRKIAVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle