YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C560_CRIGR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLLRHVG RHCLRAHLNS QICLRNAVPL GTTAKEEMER FWNKNTSSKR PVSPHLTIYR  60
   61 WSLPMVMSIC HRGTGVALSG GVSLFGLSAL LLPGNFESYL MFIKSLCLGP ALIHSAKFVL 120
  121 VFPLMYHSLN GIRHLIWDLG KGLSISQVYQ SGVAVLMLAV LSSVGLAAM

Type	Start	End	Confidence
Cytoplasmic	1	68	0.94
Transmembrane Helix	69	92	0.88
Non-Cytoplasmic	93	105	0.74
Transmembrane Helix	106	127	0.77
Cytoplasmic	128	146	0.71
Transmembrane Helix	147	168	0.89
Non-Cytoplasmic	169	169	0.87