YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CD209_HYLLA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSKEPSVQ QLGLLEEEQL RGLGFRQTRG YKSLAGCLGH GALVLQLLSF TLLAGLLIQV  60
   61 SKFPSSISQE QSKQDAIYQN LTQLKAAVGE FSEKSKLQEI YQELTQLKAA VGELPEKSKQ 120
  121 QEIYQELTRL KAAVGELPEK SKQQEIYQEL TRLKAAVGEL PEKSKQQEIY QELTRLKAAV 180
  181 GELPEKSKQQ EIYQELTRLK AAVGELPEKS KQQEIYQELT RLKAAVGELP EKSKQQEIYQ 240
  241 ELTRLKAAVG ELPEKSKQQE IYQELTRLKA AVGELPEKSK QQEIYQELTQ LKAAVERLCR 300
  301 PCPWEWTFFQ GNCYFMSNSQ RDWHDSVTAC QEVGAQLVVI KSAEEQNFLQ LQSSRSNRFA 360
  361 WMGLSDLNQE GTWQWVDGSP LSPSFKQYWN RGEPNNVGEE DCAEFSGNGW NDDKCNLAKF 420
  421 WICKKSAASC SRDEEQFLSP APATPNPPPV

Type	Start	End	Confidence
Cytoplasmic	1	35	0.94
Transmembrane Helix	36	58	0.91
Non-Cytoplasmic	59	450	0.99