YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2462271
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGTRCLLA LLLPQVLLGG AAGLIPELGR RKFAASWPGR SSSQPSDDVL SEFELRLLSM  60
   61 FGLKQRPTPS RDPVVPPYML DLYRLHSGQP GAPAPGHRLE RAASLANTVR TFHHEESLEE 120
  121 LPEMSGKTTR RFFFNLTSIP TEEFITSAEL QVFGKHMPEA LENNSSFHHR INIFEIIKPA 180
  181 TANSKFPVTR LLDTRLVTQN ASRWESFDVT PAVMRWTAQG LTNHGFVVEV AHPEDSYGAS 240
  241 KRHVRISRSL HQDEHSWSQI RPLLVTFGHD GKGHPLHRRE KRQAKHKQRK RLKSSCKRHP 300
  301 LYVDFSDVGW NDWIVAPPGY HAFYCHGECP FPLADHLNST NHAIVQTLVN SVNSKIPKAC 360
  361 CVPTELSAIS MLYLDENEKV VLKNYQDMVV EGCGCR

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	396	0.99