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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22096331
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.77
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISIGRIAW QILAVLIAVA FTIEHDSICD ESIGACGEPI HTVIRLAKRD DELARRIAAD  60
   61 HDMHVKGDPF LDTHYFLYHS ETTRTRRHKR AIVERLDSHP AVEWVEEQRP KKRVKRDYIL 120
  121 LDNDVHHSNP FRRSVLNRDG TRRAQRQQPQ SPAEIPSLPF PDPLYKDQWY LHGGAVGGYD 180
  181 MNVRQAWLQG YAGRNVSVSI LDDGIQRDHP DLAANYDPLA STDINDHDDD PTPQNNGDNK 240
  241 HGTRCAGEVA ALAGNNQCGV GVAFKAKIGG VRMLDGAVSD SVEAASLSLN QDHIDIYSAS 300
  301 WGPEDDGKTF DGPGPLAREA FYRGIKNGRG GKGNIFVWAS GNGGSSQDSC SADGYTTSVY 360
  361 TLSISSATYD NHRPWYLEEC PSSIATTYSS ADFRQPAIVT VDVPGGCTDK HTGTSASAPL 420
  421 AAGIIALALE ANPELTWRDM QHLVLRTANW KPLENNPGWS RNGVGRMVSN KFGYGLIDGG 480
  481 ALVNMAKTWK TVPEQHICTY EYRLANPNPR PIVGRFQLNF TLDVNGCESG TPVLYLEHVQ 540
  541 VHATVRYLKR GDLKLTLFSP SGTRSVLLPP RPQDFNANGF HKWPFLSVQQ WGEDPRGTWL 600
  601 LMVESVTTNP AATGTFHDWT LLLYGTADPA QSGDPVYSAT PATSQGVLSR VHQLTSQVEE 660
  661 SARSSFPDLT SGWKLSCDEC NGGCTESSSA TSCFAYKHLT QTLRNKGGSG FKCVQKCDDT 720
  721 YYLDGDKCKM CSSHCHTCTK AEVCETCPGS LLLIDVDNMP HYDHGKCVES CPPGLVADYE 780
  781 SNLVQAKCIW RKDLCGDGYY INAVGKCDLC DSSCETCTAP GPMSCEKCSK GYGKGSIGYC 840
  841 RPCCPEGSTK SWQCEDCSKP DPTLLIDSNK SSGFGLMFWI VVSLIAACGI CACKKCASET 900
  901 KSSNVEYAPL AQYNATNGAI NLGAHTDDED DDEDEVFVNP QIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle