YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|142602, gi\|67774
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNTLLKVG LCVSLLGTTQ FVSTISSVQA SQKVEQIVIK NETGTISISQ LNKNVWVHTE  60
   61 LGYFNGEAVP SNGLVLNTSK GLVLVDSSWD NKLTKELIEM VEKKFQKRVT DVIITHAHAD 120
  121 RIGGITALKE RGIKAHSTAL TAELAKKSGY EEPLGDLQTV TNLKFGNTKV ETFYPGKGHT 180
  181 EDNIVVWLPQ YQILAGGCLV KSAEAKNLGN VADAYVNEWS TSIENMLKRY RNINLVVPGH 240
  241 GKVGDKGLLL HTLDLLK

Type	Start	End	Confidence
Signal Peptide	1	30	0.96
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	257	0.99