YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|217956908, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWIRKYHIA IAWMIATSAM LISLFFSEWM KLPPCDLCWY QRMAMYPLVL ILGIGMYRKD  60
   61 PRVSMYAFPF TCIGLILSVY QITIQAFPIN EMKICSVGVS CTEDYLNLFG FISIPMLSFI 120
  121 GFLVIIILIY IESDRETKE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.90
Transmembrane Helix	9	29	0.93
Non-Cytoplasmic	30	37	0.87
Transmembrane Helix	38	57	0.92
Cytoplasmic	58	64	0.86
Transmembrane Helix	65	84	0.94
Non-Cytoplasmic	85	107	0.90
Transmembrane Helix	108	131	0.91
Cytoplasmic	132	139	0.96