YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BDBC2_BACAN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIIRKYHIA IAWTIATSAM LISLIFSEWM KLPPCDLCWY QRMAMYPLVL ILGIGMYRKD  60
   61 SNVSIYAFPF ACIGLIISVY QITIQAFPTS EMKICSVGVS CTENYLNLFG FISIPMLSFV 120
  121 GFLAIIILLY INQIKRQKNK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.91
Transmembrane Helix	9	30	0.91
Non-Cytoplasmic	31	37	0.90
Transmembrane Helix	38	57	0.92
Cytoplasmic	58	64	0.83
Transmembrane Helix	65	84	0.95
Non-Cytoplasmic	85	107	0.94
Transmembrane Helix	108	131	0.90
Cytoplasmic	132	140	0.91