YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BDBC_DEIRA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRDTRLYLA WLVALAATLG SLYFSEIRHF NPCPLCWAQR IFMYPLAVIL GIAAFVGDHG  60
   61 VRRYVLPLAA LGLGFAIFQN LETWGFVQSI KACTVNAAAA CNTPWPVWGT SQDTLNRALT 120
  121 IPVLSMIAFA LILALLSWPR QRVTVPESAA VQG

Type	Start	End	Confidence
Cytoplasmic	1	6	0.90
Transmembrane Helix	7	27	0.92
Non-Cytoplasmic	28	35	0.82
Transmembrane Helix	36	57	0.87
Cytoplasmic	58	63	0.73
Transmembrane Helix	64	81	0.86
Non-Cytoplasmic	82	117	0.77
Transmembrane Helix	118	138	0.94
Cytoplasmic	139	153	0.85