YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BDBC_COXBU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVSRLLKNY SLYFAWLTAL IATLGSLYLS LVRHIPVCDL CWYQRVCIYP LTILLGIAAY  60
   61 RTDRGVVKYA LPLVVLGFLF SVYQYLQQMI PGFAPINLCG STSPHCSEIH WEIFGFITLP 120
  121 FLGMLATLIM SFFLIMAFYS LDKRLAN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.89
Transmembrane Helix	12	32	0.95
Non-Cytoplasmic	33	40	0.84
Transmembrane Helix	41	60	0.92
Cytoplasmic	61	66	0.82
Transmembrane Helix	67	86	0.92
Non-Cytoplasmic	87	116	0.91
Transmembrane Helix	117	139	0.91
Cytoplasmic	140	147	0.88