YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|255506751
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKHLRSYCL YLAWLFSCIG TLMSVYYSYI LNVEPCLLCY YQRICLFPLV VILGIAAYRE  60
   61 DISIKIYTLP LALVGFGIAI YQVCLQEIPG MTLDICGKVS CSTKLFLLGF ITMPMASAAA 120
  121 FCAIACLLVL ATKSK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.97
Transmembrane Helix	8	30	0.92
Non-Cytoplasmic	31	38	0.84
Transmembrane Helix	39	58	0.95
Cytoplasmic	59	65	0.87
Transmembrane Helix	66	85	0.94
Non-Cytoplasmic	86	109	0.88
Transmembrane Helix	110	131	0.93
Cytoplasmic	132	135	0.87