YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16752812, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINFIRSYAL YFAWAISCAG TLISIFYSYI LNVEPCILCY YQRICLFPLT VILGISAYRE  60
   61 DSSIKLYILP QAVLGLGISI YQVFLQEIPG MQLDICGRVS CSTKIFLFSY VTIPMASVVA 120
  121 FGAIVCLLVL TKKYRG

Type	Start	End	Confidence
Cytoplasmic	1	9	0.87
Transmembrane Helix	10	31	0.94
Non-Cytoplasmic	32	38	0.84
Transmembrane Helix	39	58	0.94
Cytoplasmic	59	65	0.87
Transmembrane Helix	66	85	0.94
Non-Cytoplasmic	86	109	0.88
Transmembrane Helix	110	131	0.92
Cytoplasmic	132	136	0.92