YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BDBC_CHLMU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKLLRSYCL YFAWLVSCIG TLMSVYYSYL LNVEPCVLCY YQRICLFPLV VILGISAYLD  60
   61 DLSVKIYALP LALIGFCIAI YQVCLQEIPG MTLDICGKVS CSTKLFLLGF ITMPMASALA 120
  121 FFAIANLLIF ATKSE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.86
Transmembrane Helix	8	30	0.91
Non-Cytoplasmic	31	38	0.77
Transmembrane Helix	39	59	0.88
Cytoplasmic	60	65	0.73
Transmembrane Helix	66	85	0.94
Non-Cytoplasmic	86	105	0.76
Transmembrane Helix	106	130	0.87
Cytoplasmic	131	135	0.71