YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BDBC_CHLCV
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRFLRNNAL YFAWLICSTG TVMSIYYSYL LNIEPCVLCY YQRICLFPLS IILGIATYRE  60
   61 DNLVKIYALP LSITGMVIAV YQICLQEISG MTIDICGRVS CSTKLFVFGF ITVPMASALA 120
  121 FCAISCLLIL SGSKKK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.91
Transmembrane Helix	10	30	0.96
Non-Cytoplasmic	31	38	0.82
Transmembrane Helix	39	58	0.93
Cytoplasmic	59	65	0.82
Transmembrane Helix	66	85	0.94
Non-Cytoplasmic	86	106	0.91
Transmembrane Helix	107	130	0.90
Cytoplasmic	131	136	0.82