YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|153799752, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKRVVRNGKK ETTTSPLCWT AGANTVVSDQ DQEPIRIWIL TCWWFLTVGI LPGSWWAYHE  60
   61 LGRGGWWFRD PVENASFMPR VLATARIHSV ILPLLHSWTS FLNIVTFPCC VSGTFSIRSG 120
  121 LLAPVHSFAT DDTRGIFLWW FFLLMTGISM ILFYQMKQQA SVRRTYKKEM VVARSTLVHL 180
  181 RHSARA

Type	Start	End	Confidence
Cytoplasmic	1	36	0.83
Transmembrane Helix	37	58	0.91
Non-Cytoplasmic	59	93	0.66
Transmembrane Helix	94	122	0.70
Cytoplasmic	123	135	0.45
Transmembrane Helix	136	156	0.93
Non-Cytoplasmic	157	186	0.49