YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	unc-69
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKTEQDDI PLADDDDTVT IISGGKTPRA AQPLPKEEPP EDPEEKARMI TQVLELQNTL  60
   61 DDLSQRVESV KEESLKLRSE NQVLGQYIQN LMSSSSVFQS SQPSRPKHSR RRFWRVRILE 120
  121 IRPIVNRRCP YHSLSFVSRA QFAQQKFSYR VQPAYFIFFT FSVRFFITFL CLCEYI

Type	Start	End	Confidence
Non-Cytoplasmic	1	153	0.61
Transmembrane Helix	154	173	0.75
Cytoplasmic	174	176	0.38