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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BASI_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAALLLALA FTFLSGQGAC AAAGFLKAPM SQEQWAGGSV VLHCEAVGSP MPEIQWWFEG  60
   61 NEPNDSCSQL WDGARLDRVH IHATYRQHAA STLSVDGLAA EDTGTYECRA SSDPDRNHLT 120
  121 RPPRVKWVRA QASVVVLEPG TIVTSVQEVD SKTQLTCFLN SSGIDIVGHR WMRGGKVLQE 180
  181 DTLPDLQMKY TVDADDRSGE YSCIFLPEPV GRGNINVEGP PRIKVGKKSE HASEGEFVKL 240
  241 ICKSEASHPP VDEWVWFKTS DTGDQTISNG TEANSKYVII STPELSELII SDLDMNVDPG 300
  301 TYVCNATNSQ GSARETISLR VRSRLAALWP FLGIVAEVLV LVTIIFIYEK RRKPDQTLDE 360
  361 DDPGAAPLKG SGSHLNDKDK NVRQRNAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle