YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41688509, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIVLLIVV IVGVLGSLAV ALPQRPYTQP LIYYPPPPTP PRIYRARRQV LGGSLTSNPS  60
   61 GGADARLDLS KAVGTPDHHV IGQVFAAGNT QTKPVSTPVT SGATLGYNNH GHGLELTKTH 120
  121 TPGVRDSFQQ TATANLFNNG VHNLDAKAFA SQNQLANGFK FDRNGAALDY SHIKGHGATL 180
  181 THANIPGLGK QLELGGRANL WQSQDRNTRL DLGSTASKWT SGPFKGQTDL GANLGLSHYF 240
  241 G

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	241	0.99