YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATTA_TRINI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTYKLILGL VLVVSASARY LVFEDLEGES YLVPNQAEDE QVLEGEPFYE NAVQLASPRV  60
   61 RRQAQGSVTL NSDGSMGLGA KVPIVGNEKN VLSALGSVDL NDQLKPASRG MGLALDNVNG 120
  121 HGLSVMKETV PGFGDRLTGA GRVNVFHNDN HDISAKAFVT KNMPDFPNVP NFNTVGGGVD 180
  181 YMYKNKVGAS LGMANTPFLD RKDYSAMGNL NVFRSPTTSV DFNAGFKKFD TPVFKSNWEP 240
  241 NFGLTFSRSF GNKW

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	254	0.99