YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPO_IPOBA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTGRARSM GFSILQKALS SAQRSNAHRS ILCPTLSNSE LLRNYATASA SKEQKIKVPL  60
   61 TMYGVSGNYA SALYLAAVKS NTLEKVESEL YDLVEASKKS PTFSQFMRDP SVPVDTRVNA 120
  121 IKEICAQAKF GDTTQNFLLI LAENGRLKHI DRIVKRFKEL TMAHRGEVKA TVTTVIPLPA 180
  181 DEEKELKATL QEMVGQGKSV QIEQKIDPTI LGGLVVEFGQ KVFDMSIRTR ARQMERFLRE 240
  241 PLNF

Type	Start	End	Confidence
Signal Peptide	1	22	0.66
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	244	0.99