YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPI_MESVI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINPSSMENF NMLYQLSKVE VGQHFYWQIG DFEVHGQVLL VSWFVMTIII SLSIFGTRNL  60
   61 QTIPTGTQNF VEYVLEFIRD LAKTQIGEED YRSWVPFIGT IFLFIFVSNW SGALVPWKLI 120
  121 EIPNGELAAP TNDINTTAAL ALLTSISYFY AGFSKKGLRY FKRYISPTPV LLPINLLEDF 180
  181 TKPLSLSFRL FGNILADELV VGVLITLVPL VVPMPLMLLG LFTSAIQALI FATLAAAYIG 240
  241 EAVEDHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.89
Transmembrane Helix	34	56	0.87
Cytoplasmic	57	92	0.92
Transmembrane Helix	93	114	0.90
Non-Cytoplasmic	115	133	0.85
Transmembrane Helix	134	153	0.91
Cytoplasmic	154	189	0.89
Transmembrane Helix	190	212	0.80
Non-Cytoplasmic	213	217	0.60
Transmembrane Helix	218	240	0.86
Cytoplasmic	241	247	0.75