YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPI_ANTFO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSAQSSISK LTNLCEISSV EVGQHFYWQI GGFQVHAQVL ITSWIVIAIL LGLAILATQN  60
   61 LQTIPTSGQN FVEYILEFIR DLTRTQIGEE EYRPWVPFIG TMFLFIFVSN WSGALLPWRI 120
  121 FELPHGELAA PTNDINTTVA LALPTSVAYF YAGLRKKGLS YSGKYIQPTP ILLPINILED 180
  181 FTKPLPLSFR LFGNILADEL VVAVPISLVP LVVPIPMMFL GLFTSAIQAL IFATLAAAYI 240
  241 GESMEGHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.58
Transmembrane Helix	35	57	0.89
Cytoplasmic	58	93	0.64
Transmembrane Helix	94	116	0.86
Non-Cytoplasmic	117	134	0.58
Transmembrane Helix	135	154	0.65
Cytoplasmic	155	190	0.79
Transmembrane Helix	191	213	0.66
Non-Cytoplasmic	214	218	0.49
Transmembrane Helix	219	241	0.88
Cytoplasmic	242	248	0.67