YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_NEUCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRLARTAV GAARLRPSVV PRVLPALSTV ASPRYSSGVP SEDPKTKAQS IIDSLPGSNL  60
   61 MSKTAILSSA AGLSIYALSN EYYVVNEETV VAFCLLSVWG GLIKFGGPLY KKWADEQSDK 120
  121 IKNILNSARA DHTQAVKTRI GDVKQMSGVI DITKTLFAVS KETAKLEAEA YELEQRTALA 180
  181 AEAKTVLDSW VRYESQVKQR QQKELAQTVI AKVQKELENP KVLKQILEQS VADVEKIVSK 240
  241 A

Type	Start	End	Confidence
Signal Peptide	1	36	0.65
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	241	0.89