YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPD_SORBI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRLASFT LRPAAAAAAS ASSGATPAAP RSASFARAAR GLPSLRLAPP RRRGDLVRPR  60
   61 AEAAADSYAS ALSEVAVENG TLEQTVSDLE KLQKIFADET VAEFFDNPTV PREEKTALID 120
  121 EIAKSYELQP HVVNFINVVV DNFRATILPE IVVEFENIFN SLTGTEVATV TSVVQLESQD 180
  181 LAQIAQHVQK MTGAKNVRLK TQLDPELIAG FTVQYGRDGS SLIDMSVRKQ IEEITSEFEL 240
  241 PDVPLEV

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	247	0.98