YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTSFFDQFA SPYLLGIPLI LVAMLLPWLL FPAPTSRWIN NRLITVQTWL TGRFTNQLMT  60
   61 PLNFSGHKWA LLFASLMVFL ITINLLGLLP YTFTPTTQLS LNMGFAVPLW LATVIIGMKN 120
  121 QPTIALGHLL PEGTPIPLIP ALIIIETISL FIRPLALGVR LTANLTAGHL LIQLIATAVF 180
  181 VLLPMMPAVA ILTASVLFLL TLLEVAVAMI QAYVFILLLS LYLQENI

Type	Start	End	Confidence
Cytoplasmic	1	8	0.80
Transmembrane Helix	9	31	0.90
Non-Cytoplasmic	32	68	0.79
Transmembrane Helix	69	89	0.95
Cytoplasmic	90	98	0.67
Transmembrane Helix	99	118	0.89
Non-Cytoplasmic	119	135	0.75
Transmembrane Helix	136	157	0.87
Cytoplasmic	158	168	0.71
Transmembrane Helix	169	191	0.86
Non-Cytoplasmic	192	197	0.55
Transmembrane Helix	198	223	0.83
Cytoplasmic	224	227	0.86