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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATP2_ORYSA
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRRALSSL VRAASRLRGA SPAPRPRGPL HRPSPSGYLF NRAAAYATAA AAKERPPAPA  60
   61 TGKATGGGKI TDEFTGAGAI GQVCQVIGAV VDVRFDEGLP PILTALEVLD HNIRLVLEVA 120
  121 QHLGENMVRT IAMDGTEGLV RGQRVLNTGS PITVPVGRAT LGRIMNVIGE PIDEKGDITT 180
  181 NHFLPIHREA PAFVEQATEQ QILVTGIKVV DLVAPYQRGG KIGLFGGAGV GKTVLIMELI 240
  241 NNVAKAHGGF SVFAGVGERT REGNDLYREM IESGVIKLGD KQSESKCALV YGQMNEPPGA 300
  301 RARVGLTGLT VAVHFRDAEG QDVLLFIDNI FRFTQANSEV SALLGRIPSA VGYQPTLATD 360
  361 LGGLQERITT TKKGSITSVQ AIYVPADDLT DPAPATTFAH LDATTVLSRQ ISELGIYPAV 420
  421 DPLDSTSRML SPHVLGEDHY NTARGVQRVL QNYKNLQDII AILGMDELSE DDRLTVRRAR 480
  481 KIQRFLSQPF HVAEVFTGAP GKYVELKESV NSFQGVLDGK YDDLPEQSFY MVGGIEEVIA 540
  541 KAEKIAKESA S

YRC Informatics Platform - Version 3.0
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