YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KDPC_CLOAB
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFKSALRL GIVLIIICGL IYPLFITAVG QTVFHNKANG SIVTFKGKEV GSALLGQNFT  60
   61 DKRFFRGRVS SVNYNTYTKN DSNKDEVASG SQNLAPSNKD LKNRVKKDID DFLKTHPGVK 120
  121 KDEIPTDLLT SSGSGLDPDI SPKAAEIQVP SVSKATGISQ SKLKQIIKKC TEGRTLGVLG 180
  181 EERVNVLKVN LEVASMLKNS KIGE

Type	Start	End	Confidence
Cytoplasmic	1	9	0.68
Transmembrane Helix	10	29	0.78
Non-Cytoplasmic	30	204	0.96