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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATCU2_RHIME, ATC...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALKKIEKA APLPVSTNFG IEGMTCASCV RRVEKAITAV PGVASANVNL ATERATVQFD  60
   61 GEPDTLAVLH AIEKAGYAPR IATEELQIEG MTCASCVSRV EKALKAVPGV ADAAVNLATE 120
  121 KATVSLISGT ADLSALEAAV RGAGYELRKT KPAEASAGDE DHRAAELGSL KSAVTISVLM 180
  181 TLPLFLMEMG SHFISGVHEL IMGTIGMRNN LYLQFALATL VLFGPGLRFF RKGVPNLLRW 240
  241 TPDMNSLVVL GTTAAWGYSV VATFVPRVLP SGTANVYYEA AAVIVTLVLL GRYLESRAKG 300
  301 RTSQAIKRLV GLQPKTAFVL RGGEFVEAQI SEVVAGDVIR IRPGEKIPVD GTVIDGSSYV 360
  361 DEAMITGEPL PVQKTADSAV VGGTINKTGS ITFKATKVGS DTLLAQIIKL VETAQGSKLP 420
  421 IQALVDRVTG WFVPAVILAA VLTFAAWYTF GPSPALSFAL VNAVAVLIIA CPCAMGLATP 480
  481 TSIMVGTGRA AELGILFRKG EALQRLRDAD VVALDKTGTL TKGRPELTDL VAAEGFEADE 540
  541 VLFLVASLET LSEHPIAEAI VSAAKSKGIA TAAVNGFEAT PGFGVSGSVS GRQVLVGADR 600
  601 ALATNGIDVS GFSTEAELLG ASGKSPLYAA IEGRLAAIVA VSDPVKETTP QAIRSLHELG 660
  661 LKVAMITGDN RRTAEAIARK LGIDEVVAEV LPEGKVEAIR KLRQGGRSVA FIGDGINDAP 720
  721 ALAEADVGIA VGTGTDIAIE SADVVLMSGD LNGVAKAIAL SKATILNIKQ NLFWAFAYNV 780
  781 SLIPVAAGVL YPVTGILLSP IFAAAAMAMS SVFVLGNALR LKSVNPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle