YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AT5G2_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTCAKFVST PSLIRRTSTV LSRSLSAVVV RRPETLTDES HSSLAVVPRP LTTSLTPSRS  60
   61 FQTSAISRDI DTAAKFIGAG AATVGVAGSG AGIGTVFGSL IIGYARNPSL KQQLFSYAIL 120
  121 GFALSEAMGL FCLMVAFLIL FAM

Type	Start	End	Confidence
Cytoplasmic	1	75	0.87
Transmembrane Helix	76	102	0.82
Non-Cytoplasmic	103	117	0.75
Transmembrane Helix	118	141	0.93
Cytoplasmic	142	143	0.75