YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AT1A_ARTSF
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKQGKQLS DLKKELELDQ HKIPLEELCR RLGTNTETGL TSSQAKSHLE KYGPNALTPP  60
   61 RTTPEWIKFC KQLFGGFQML LWIGSILCFI AYTMEKYKNP DVLGDNLYLG LALLFVVIMT 120
  121 GCFAYYQDHN ASKIMDSFKN LMPQFAFVIR DGKKIQLKAE EVTVGDLVEV KFGDRIPADI 180
  181 RITSCQSMKV DNSSLTGESE PQSRSTECTN DNPLETKNLA FFFTNTLEGT GRGIVINVGD 240
  241 DSVMGRIACL ASSLDSGKTP IAREIEHFIH IITAMAVSLA AVFAVISFLY GYTWLEAAIF 300
  301 MIGIIVAKVP EGLLATVTVC LTLTAKRMAK KNCLVRNLEA VETLGSTSTI CSDKTGTLTQ 360
  361 NRMTVAHMWF DQKIVTADTT ENQSGNQLYR GSKGFPELIR VASLCSRAEF KTEHAHLPVL 420
  421 KRDVNGDASE AAILKFAEMS TGSVMNIRSK QKKVSEIPFN SANKYQVSVH EREDKSGYFL 480
  481 VMKGAPERIL ERCSTILIDG TEIPLDNHMK ECFNNAYMEL GGMGERVLGF CDFELPSDQY 540
  541 PRGYVFDADE PNFPISGLRF VGLMSMIDPP RAAVPDAVSK CRSAGIKVIM VTGDHPITAK 600
  601 AIARQVGIIS EGHETVDDIA ARLNIPVSEV NPRSAQAAVI HGNDLKDMNS DQLDDILRHY 660
  661 REIVFARTSP QQKLIIVEGV QRQGEFVAVT GDGVNDSPAL KKADIGVAMG IAGSDVSKQA 720
  721 ADMILLDDNF ASIVTGVEEG RLIFDNIKKS IAYTLTSKIP ELSPFLMYIL FDLPLAIGTV 780
  781 TILCIDLGTD VVPAISMAYE GPEADPRKPR DPVKEKLVNE RLISMAYGQI GVMQAFGGFF 840
  841 TYFVIMGECG FLPNRLFGLR KWWESKAYND LTDSYGQEWT WDARKQLEYT CHTAFFISIV 900
  901 IVQWTDLIIC KTRRLSLFQQ GMKNGTLNFA LVFETCVAAF LSYTPGMDKG LRMYPLKIWW 960
  961 WFPPMPFSLL ILVYDECRKF LMRRNPGGFL ERETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle