YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7435926
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQNLPTIAL LATGGTIAGS GVDASLGSYK SGELGVKELL KAIPSLNKIA RIQGEQVSNI  60
   61 GSQDMNEEIW FKLAQRAQEL LDDSRIQGVV ITHGTDTLEE SAYFLNLVLH STKPVVLVGA 120
  121 MRNASSLSAD GALNLYYAVS VAVNEKSANK GVLVVMDDTI FRVREVVKTH TTHISTFKAL 180
  181 NSGAIGSVYY GKTRYYMQPL RKHTTESEFS LSQLKTPLPK VDIIYTHAGM TPDLFQASLN 240
  241 SHAKGVVIAG VGNGNVSAGF LKAMQEASQM GVVIVRSSRV GSGGVTSGEI DDKAYGFITS 300
  301 DNLNPQKARV LLQLALTKTN DKAKIQEMFE EY

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	332	0.99