YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|107099234
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTVLVLNG PNLNLLGTRE PQTYGRRTLG EIADECAAFA ETRGFAVDFR QTNQEGQLLD  60
   61 WIHQARGRVA GIVINPAAWT HTSVALRDAL AAVELPVVEV HLSNVHQREA FRHHSYVSPV 120
  121 ALGVICGFGS LGYRLALEHF AERFEAAA

Type	Start	End	Confidence
Cytoplasmic	1	114	0.64
Transmembrane Helix	115	137	0.76
Non-Cytoplasmic	138	148	0.73