YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261612, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNIHIQTKS KEYDVYVGKE SLSHLTTIVQ NMQPSVSNIM IISDEAVASL HLQTVVDALQ  60
   61 IDQKVFSFVV PSGEKEKSFE NFYAAHTSAL ENKLDRNSLI IALGGGMIGD LAGFVAASFM 120
  121 RGIRFVQVPT TLLAHDSAVG GKVAINHPLG KNMIGAFHQP EAVVYHTPFL QSLPEKEWRS 180
  181 GYAEVIKHAL IGDVKLYHWL KEEVQTLADL RDEKLIHILM KAIPVKANIV AQDETEKGVR 240
  241 AHLNFGHTLG HALEKELGYG NITHGDGVAV GMLFAIFLSE QVYKVNLAYE EMKQWFLNYG 300
  301 YPKMPSDLSV ERLVGLMKQD KKANAGTIHM VLMQEYGVVN VVSIPDETVH IALEAFQKDM 360
  361 VEK

Type	Start	End	Confidence
Cytoplasmic	1	98	0.78
Transmembrane Helix	99	120	0.76
Non-Cytoplasmic	121	363	0.95