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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ARO1_PNECA
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEIIKLSIL GKDSIHIGLH LWPHITNELF TCIFSPTYVI ITDSNIETLY IPSFKTYFIS  60
   61 MAKQRSINSR LLFFTIPPGE KSKSRKTKAL IEDWLLSEKC TRDTVIIAIG GGVIGDLVGY 120
  121 VSATFMRGVR FIQIPTTLLA MVDSSIGGKN SINTSYGKNA IGTIWQPERI FIDFTFLETL 180
  181 TEKEFINGIA ELIKTIIIWD ESEFASLENI SEKIAKTVRS MSLTSNKHSK FNEIIKDLKR 240
  241 YIISSIKIKA HIVSIDEKEK DLRTLLNFGH SIGHAIETVL APYILHGESI SIGMVKEAEL 300
  301 SRHLGILNPN VVSRLIKCLN TWGLPTSFKD RRFKEVILGK KHLIEDILEI MSIDKKNDSN 360
  361 NKKIVLLSAI GKTYEKKASS VSDDDIRTIL SQNILLYGIP LNAFQKHTTI TLPGSKSISN 420
  421 RALILASLSN GICYLKNFLH SDDTYYMLSA LEKLNAAEFK WEQDGDVLVV KGKSGYLENP 480
  481 QMELYLGNSG TTARFLTSIC TLVQPNSREN HLILTGSNRM KQRPIGPLVD ALKNNGCCIE 540
  541 YLELENCLPL LIKPKEIGLY GGNINLSATV SSQYVSSILM CSPYAKTQVT LSLIGGKPIS 600
  601 QPYIDMTISM MSSFGIKVTR SHSKENTYYI PKGCYTCPSE YIIEGDATSA TYPLAIAAIT 660
  661 GGSCTISNVG SASLQGDSKF SEYILKPMGC EVVQSPTTTY IKGPPKGKLK SLGSINMESM 720
  721 TDTFLTAAVL ASVAYEESKP YVTKITGISN QRIKECNRIN AMVCELKKFG IEAGELPDGI 780
  781 YVKALNTSNL PYSVEGINCY NDHRIAMSFS VLACISSKPT TILDKACVNK TWPYWWDILN 840
  841 STFKVQMKGI EFDLNPTINS SILHHPSECT IFLIGMRGAG KTTLGQLAAN FLGREFIDLD 900
  901 SIIEEDIKTT ILEFIQKYSW DVFRRKELHF LKTLLTEKKE NYIISCGGGI IETEEARDLL 960
  961 ISYIEANGIV IHIHRNIQDI IKYLNTDKTR APYQDNIMHV WERRKRWYNL CSSHQFHMTS1020
 1021 TDPTEFKKNI PLNLKSSFNN FLRTITGKNN IFSLILKKKR SYFLSLAFSD LENIFSLLDI1080
 1081 ITAGCDAIEI RIDLFQKPEE IDKYPSLEYI AEKIFLLRQK TSLPLIYTLR TTNHGGSFLS1140
 1141 SEKKLAKEYI LHGAKWGFEF LDIELDIASE LFKTINNSWP YTKIIASYHN IEKPISCDDF1200
 1201 EWIQKYKEAQ HYGHIIKLVG TSSSIEDNFF LEEFKSKFIN KKVPSIIINT GIKGQLSRIM1260
 1261 NTFMTPVTHP SLPSKIAPGQ LSIKEINTAL HIMGLLPEKK YFLFGKPIKH SQSPNIHNLG1320
 1321 FEILGLPYKY QLFETDSISE LKEILHLEEF GGASVTIPLK TNISILLDEI SDHAALIGSV1380
 1381 NTITRTYNNG QYILKGENTD WQGIIKAIKN FNKFEKSFEN FSGFIIGAGG ASRAAIYALL1440
 1441 SLGISPIYLI NRSKDKLNKL YHFFNTNHII PITEYHELNN INFDIRIGIS TIPTDNPIDP1500
 1501 SVLEIAKIFF NLKRKSSEGI FLDMAYGSNT TDLTIIAKAC NWKIIHGLEI LLEQGSEQFL1560
 1561 LWTETYIPYN QVKYAILGPN K

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