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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AREA_ASPNG
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLTLGGGG SGGVRPTQPA AFASLQDSAD ADRRSSTTTS NNPPPLPSDF SQLSDDFSFG  60
   61 SPISPPHSSN APDSLLHDSL FPEWKVGTPR AGFDGPDEMQ RKDPLATQIW KLYSRTKAQL 120
  121 PNQERMENLT WRMMAMSLKR KERERAQQSR SASARNSVSG PSGIAQLTSP PLIASRPTRQ 180
  181 NPSLSTDLTS DPMNLERIFI VPFESPSDHP SPQLTKGEAT SAAIPIKSRK DQVAESTPVP 240
  241 ASFPHPPQDQ RKNSEFGYVP RRVRKTSIDD RQFFNLQVPT RKRPAEASPQ VPPVSNAMLA 300
  301 QDPDLSGGVP DYALDASSAF ALHHNNHSSS HHNHTSPGMP FGLDTYGLGE DPILTSAGPY 360
  361 QTQFTFSPTE SPMTSGNPFA NLYAHTPVAS SLNSTDFFSP PQSGYQSTAS TPQPAYDGEH 420
  421 SMFFDMPSVD ARTQRRVPNY VSHRTSNLSA SLQPRYMFNQ NQDQSHHTGN HSSSMHSPGY 480
  481 PIPQPQHVDP TQVLNPNDFS TGASHAAMFS FGADSDNEDD DGNQFSDRAG LTMPGDLDDG 540
  541 ADMNGGMQWD AQFPGSFHSL PGFTAQHRKH VTIGPTDMMD TPSEWAQSGS LGRTHGSAAS 600
  601 VSEVRNREQD PRRQKIARTT STPNTAQLLR QSMNANTSHT SPNTPPESGL SSAVPSRPAS 660
  661 PGGSKNGEQS SGPTTCTNCF TQTTPLWRRN PEGQPLCNAC GLFLKLHGVV RPLSLKTDVI 720
  721 KKRNRSSANS LAVGTSRASK KSARKNSVQQ TTVTTPTSSR AQSGATSFGV RRPRAGAVRR 780
  781 AEPLVPIAAA PPKANPTTSS PGQSRGTSSV QMAPKRQRRL EKATDAEAGG DEASKSSTAS 840
  841 GGRSKVVALA PAMPPAAANP ANHSIAGGQG ASQEWEWLTM SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle