YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-103
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSVPMIDL SSGDDEEVEV AMRRSYLLPP VPERPDGFPS LLFGNGNLSR STLSINQEIS  60
   61 MAPSPFSEIT VSSQRPLVAR SGSNSSEHNL QIKEAVKKKP VADIAHVSGT FVCVCVRGAQ 120
  121 KVLSLGADVL PEYKLQPTRI HHCTIVHYSP FKAVWDWIIL LLVIYTAVFT PYVAAFLLRE 180
  181 LQDTAKKSRF TEPLEIVDLI VDIMFIVDII INFRTTYVNE NDEACQVVSD PGKIATHYFK 240
  241 GWFIIDMVAA VPFDLLLVST NSDETTTLIG LLKTARLLRL VRVARKLDRY SEYGAAVLLL 300
  301 LMATFALIAH WLACIWYAIG SAELSHKEYT WLHQLSKQLA QPYTSTNGTI PTGGPTLKSR 360
  361 YVTSLYFTLS TITSIGFGNV SATTDSEKIF TIIMMILGSL MYASVFGNVS AIIQRLYSGT 420
  421 ARYHTEMSRL REFIRFHQIP NPLRQRLEEY FQHAWSYTNG IDMNLVLKGF PDCLQADICL 480
  481 HLNRNLLSGC AAFAGSTPGC LRALSMRFRT THSPPGDTLV HRGDILTGLY FIARGSVEIL 540
  541 NDDNTVMGIL GKDDIFGENP LLYDEVGKSS CNVRALTYCD LHKILRDDLL DVLDMYPEFA 600
  601 ETFCKNLTIT YNLRDDAQSL RKKFDRHKLL RMSSSMNKDR YTTPPDGDHG NAAVRRSAES 660
  661 VSRCDSNPID RRQSAGSRSS SRCSPPHAAL TATRSEATPL LRRSTNHHEE DDALFDDIRA 720
  721 FARGNTVTMS PTVAGNSVSP TTAIHNDGIH SQQLSDRSDD YEERRANMFG RRLESIESQM 780
  781 ERMQNKFNSD METLIKLVKE QSIIRNNGSS NEEPNARYRP NNYISSAIRL PNGGGGGVVD 840
  841 EMRVSRLSSH EPPTPTQETD TIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle