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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-103
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGGGGGGA GGSSTRRNAA IASTSSTTSS AAGRRASAFV RRMSMAIPTL SADPVPFSAV  60
   61 LSLGADVLPE YKLQPTRIHH CTIVHYSPFK AVWDWIILLL VIYTAVFTPY VAAFLLRELQ 120
  121 DTAKKSRFTE PLEIVDLIVD IMFIVDIIIN FRTTYVNEND EACQVVSDPG KIATHYFKGW 180
  181 FIIDMVAAVP FDLLLVSTNS DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLLLLM 240
  241 ATFALIAHWL ACIWYAIGSA ELSHKEYTWL HQLSKQLAQP YTSTNGTIPT GGPTLKSRYV 300
  301 TSLYFTLSTI TSIGFGNVSA TTDSEKIFTI IMMILGSLMY ASVFGNVSAI IQRLYSGTAR 360
  361 YHTEMSRLRE FIRFHQIPNP LRQRLEEYFQ HAWSYTNGID MNLVLKGFPD CLQADICLHL 420
  421 NRNLLSGCAA FAGSTPGCLR ALSMRFRTTH SPPGDTLVHR GDILTGLYFI ARGSVEILND 480
  481 DNTVMGILGK DDIFGENPLL YDEVGKSSCN VRALTYCDLH KILRDDLLDV LDMYPEFAET 540
  541 FCKNLTITYN LRDDAQSLRK KFDRHKLLRM SSSMNKDRYT TPPDGDHGNA AVRRSAESVS 600
  601 RCDSNPIDRR QSAGSRSSSR CSPPHAALTA TRSEATPLLR RSTNHHEEDD ALFDDIRAFA 660
  661 RGNTVTMSPT VAGNSVSPTT AIHNDGIHSQ QLSDRSDDYE ERRANMFGRR LESIESQMER 720
  721 MQNKFNSDME TLIKLVKEQS IIRNNGSSNE EPNARYRPNN YISSAIRLPN GGGGGVVDEM 780
  781 RVSRLSSHEP PTPTQETDTI L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle