YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-103
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTAVFGRDS GEPGSPCGAP PSLTFTPPAT LVPPTHHHSR STNRGGVSGT GGGGSGGLQG  60
   61 APGAGGPRAS HSSRRTSRLH NNVSALGVLS LGADVLPEYK LQPTRIHHCT IVHYSPFKAV 120
  121 WDWIILLLVI YTAVFTPYVA AFLLRELQDT AKKSRFTEPL EIVDLIVDIM FIVDIIINFR 180
  181 TTYVNENDEA CQVVSDPGKI ATHYFKGWFI IDMVAAVPFD LLLVSTNSDE TTTLIGLLKT 240
  241 ARLLRLVRVA RKLDRYSEYG AAVLLLLMAT FALIAHWLAC IWYAIGSAEL SHKEYTWLHQ 300
  301 LSKQLAQPYT STNGTIPTGG PTLKSRYVTS LYFTLSTITS IGFGNVSATT DSEKIFTIIM 360
  361 MILGSLMYAS VFGNVSAIIQ RLYSGTARYH TEMSRLREFI RFHQIPNPLR QRLEEYFQHA 420
  421 WSYTNGIDMN LVLKGFPDCL QADICLHLNR NLLSGCAAFA GSTPGCLRAL SMRFRTTHSP 480
  481 PGDTLVHRGD ILTGLYFIAR GSVEILNDDN TVMGILGKDD IFGENPLLYD EVGKSSCNVR 540
  541 ALTYCDLHKI LRDDLLDVLD MYPEFAETFC KNLTITYNLR DDAQSLRKKF DRHKLLRMSS 600
  601 SMNKDRYTTP PDGDHGNAAV RRSAESVSRC DSNPIDRRQS AGSRSSSRCS PPHAALTATR 660
  661 SEATPLLRRS TNHHEEDDAL FDDIRAFARG NTVTMSPTVA GNSVSPTTAI HNDGIHSQQL 720
  721 SDRSDDYEER RANMFGRRLE SIESQMERMQ NKFNSDMETL IKLVKEQSII RNNGSSNEEP 780
  781 NARYRPNNYI SSAIRLPNGG GGGVVDEMRV SRLSSHEPPT PTQETDTIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle