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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-103
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRTRPSVRN YSLDLTRHRK LTADAKAVSP SSCSVKFMPE VLDNHGTTTS ARKHSSLSQP  60
   61 ALRCHSKQHH NILSPHALAV LSLGADVLPE YKLQPTRIHH CTIVHYSPFK AVWDWIILLL 120
  121 VIYTAVFTPY VAAFLLRELQ DTAKKSRFTE PLEIVDLIVD IMFIVDIIIN FRTTYVNEND 180
  181 EACQVVSDPG KIATHYFKGW FIIDMVAAVP FDLLLVSTNS DETTTLIGLL KTARLLRLVR 240
  241 VARKLDRYSE YGAAVLLLLM ATFALIAHWL ACIWYAIGSA ELSHKEYTWL HQLSKQLAQP 300
  301 YTSTNGTIPT GGPTLKSRYV TSLYFTLSTI TSIGFGNVSA TTDSEKIFTI IMMILGSLMY 360
  361 ASVFGNVSAI IQRLYSGTAR YHTEMSRLRE FIRFHQIPNP LRQRLEEYFQ HAWSYTNGID 420
  421 MNLVLKGFPD CLQADICLHL NRNLLSGCAA FAGSTPGCLR ALSMRFRTTH SPPGDTLVHR 480
  481 GDILTGLYFI ARGSVEILND DNTVMGILGK DDIFGENPLL YDEVGKSSCN VRALTYCDLH 540
  541 KILRDDLLDV LDMYPEFAET FCKNLTITYN LRDDAQSLRK KFDRHKLLRM SSSMNKDRYT 600
  601 TPPDGDHGNA AVRRSAESVS RCDSNPIDRR QSAGSRSSSR CSPPHAALTA TRSEATPLLR 660
  661 RSTNHHEEDD ALFDDIRAFA RGNTVTMSPT VAGNSVSPTT AIHNDGIHSQ QLSDRSDDYE 720
  721 ERRANMFGRR LESIESQMER MQNKFNSDME TLIKLVKEQS IIRNNGSSNE EPNARYRPNN 780
  781 YISSAIRLPN GGGGGVVDEM RVSRLSSHEP PTPTQETDTI L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle