YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-103
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTNHTGI IQHHPSQSQQ QATTSSGAGN AVASQAKQLM VVLQSGSYKV LSLGADVLPE  60
   61 YKLQPTRIHH CTIVHYSPFK AVWDWIILLL VIYTAVFTPY VAAFLLRELQ DTAKKSRFTE 120
  121 PLEIVDLIVD IMFIVDIIIN FRTTYVNEND EACQVVSDPG KIATHYFKGW FIIDMVAAVP 180
  181 FDLLLVSTNS DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLLLLM ATFALIAHWL 240
  241 ACIWYAIGSA ELSHKEYTWL HQLSKQLAQP YTSTNGTIPT GGPTLKSRYV TSLYFTLSTI 300
  301 TSIGFGNVSA TTDSEKIFTI IMMILGSLMY ASVFGNVSAI IQRLYSGTAR YHTEMSRLRE 360
  361 FIRFHQIPNP LRQRLEEYFQ HAWSYTNGID MNLVLKGFPD CLQADICLHL NRNLLSGCAA 420
  421 FAGSTPGCLR ALSMRFRTTH SPPGDTLVHR GDILTGLYFI ARGSVEILND DNTVMGILGK 480
  481 DDIFGENPLL YDEVGKSSCN VRALTYCDLH KILRDDLLDV LDMYPEFAET FCKNLTITYN 540
  541 LRDDAQSLRK KFDRHKLLRM SSSMNKDRYT TPPDGDHGNA AVRRSAESVS RCDSNPIDRR 600
  601 QSAGSRNRSD DYEERRANMF GRRLESIESQ MERMQNKFNS DMETLIKLVK EQSIIRNNGS 660
  661 SNEGRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle