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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|156523287, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGEGGDEE IQFLRTEDQV VLQCTATVLK EQIKLCLSCE GFGNRLCFLE TTSNAQNVPP  60
   61 DLAICSFVLE QSLSVRALQE MLANTVDMTE SSQGGGHRTL LYGHAILLRH YHSSMYLSCL 120
  121 TTSRSLTDKL AFDVGLQLDA TGEACWWTIH PASKQRSEGE KVRVGDDLIL VSVSSERYLH 180
  181 LSYASGDLMV DASFMQTLWN MNPVCSGCEL AEGYLTGGHV LRLFHGHMDE CLAISTPDQG 240
  241 EEQRKIAQYE GGAVCSQARS LWRLEPLRIG WSGSHMKWGQ AFRVRHITTG RYLCLDDEKG 300
  301 LMVLDPEKAN TKQSAFSFRA SKEKVEGEKK KRDVEGMGIP EIKYGESMCF MQHISTGLWL 360
  361 TYAALDAKAA RLGTMKRRVM LHQEGHMDDA LTCSRSQTEE SQAARMIYST TGLFTQFIKG 420
  421 LDSLSGKNKS PGPVSLPLDG VILSLQDLIH YFRPPEEELE HEEKQTKLRS LRNRQNLFQE 480
  481 EGMITIVLEC IDRLNVYNTA AHFSEFAGEE AAESWKEIVN LLYELLASLI RGNRSNCALF 540
  541 CDNLDWLVSK LDRLEASSGI LEVLYCVLIE SPEVLNIIQE NHIKSIISLL DKHGRNHKVL 600
  601 DVLRSLCVCN GVAVRSNQNL ITENLLPGRD LLLQTNIVNY ASSVRPNIFL GTCEGSTQYK 660
  661 KWYFEVMVDY VESFVTAQAT HLRVGWAMTE GFSPYPGGGE GWGGNGVGDD LYSYGFDGLH 720
  721 LWSGHVSRQV ASPNQHALAA DDVVSCCLDL SVPSISFRIN GHPVQGMFEN FNLDGLFFPA 780
  781 ISFSAGVKAR FLLGGRHGDF KFLPPPGYAP CYEALLPKDR MRIEPIKEYK HDFEGVRNLL 840
  841 GPTQSLTHTS FTPCPVDTAQ IVLPPHLERI REKLAENIHE LWAVTRIEQG WTYGVFRDDN 900
  901 KKLHPCLVDF QSLPEPERNY NLQMSGETLK TLLALGCHVG MGDEKAEENL RKIKLPKTYV 960
  961 MSSGYKPAPL DLNHVKLTPN QNQLVEKLAE NGHNVWARDR VRQGWTYSIV QDIVNKRNPR1020
 1021 LVPYNLLDER TKKTNRDSVN NAVRTLIGYG YNIEPPDQES SGHGVEDVHG DKVRIFRAEK1080
 1081 QYGVTSGKWY FEFEAVTTGE MRVGWARPNV RSDVELGSDE LAYVFNGNRA QRWHIGNDPF1140
 1141 GRQWQSGDVV GCMIDLIEMN IMFTLNGEML ISDSGSEMAF KDIEIGDGFI PVCTLGLSQV1200
 1201 GRINLGQNVS SLRYFAICGL QEGFEPFAIN MKRDITMWFS KSLPQFVPVP TDHNHIEVSR1260
 1261 VDGTVDSAPC IKITHKTFGS QNANTDMLFF RLSMPVEFHL TFKVPAGTTP LTRALTIPEE1320
 1321 EVLEVDPDSD YEVLKKSASR KEQEEKEKEP SVPKDIPGVK ENDKDTASEK GKKKGFLFKA1380
 1381 KKAAMITPPP PPPLMPRLIE DVVPDDRDDV DIILNTTTYY YSVRIFAGQE PSEVWVGWVT1440
 1441 PDFHMYDLNF DLSKVRTVTV TVGDDKGNIH DSIKRSNCYM VWGGEFSSSQ QKFSQEDLVI1500
 1501 GCLVDLATGL LNFTANGKEI NTFYQVEPNT KLFPAVFVLP SSQNMLQLEL GKLKNIMPLS1560
 1561 AAMFRSERKN PVPQCPPRLD VQMLTPVIWS RMPNHFLNPV VGRVSERHGW MVECTEPLTM1620
 1621 MALHIPEENR CIDILELSEQ HDLLQFHYHT LMLYCAVCAL GNNRVAHALC SHVDESQLFY1680
 1681 AIENTYLPGP LRSGYYDLLI SIHLESAKRN RLGTNREFIV PMTSETLSIT LFPDAEAAHD1740
 1741 LPGVGLTTCL RPKLHFSPIN FVGTDPDLYT LSPIIPLQNL KTQALSMLTE AVFDGSQAMR1800
 1801 DPVGGSVEFH FVPILKLIST LLIMGIFNNE DVKHILKMID PSVFGKKEEA EEPAEEAAPK1860
 1861 EEGEEVKEKE ETAEGEEEAV DEGVGEEEEE ELKELKKEEG EEGEEVEKAV EEEDGEKVDG1920
 1921 EKAEEEKEAE EVGEEAKEEE EEAPEEGLLQ MKMPESVKLQ MCTLLQYFCD CELRHRVEAI1980
 1981 MAYSDNFVGQ IQSNQRERYN ELMRAFTMSA AETARRTREF RSPPQEQIFL LTNFKHNPEE2040
 2041 EDCPVPDEVR ETHNNFHNDL LNHCGVHIEE EVEEEEVDTS LRGRLLTLVD KVKSLKQKKE2100
 2101 EEEPEPEEEP KPSTLQELIS HTMIHWAQEA FIQNPELVRL MFSLLHRQYD ALGELIRALP2160
 2161 KAYAISAVSV QDTMEMLECL GQIRSLLIVQ MGPEEERLMI QSIGNIMNNK VFYQHPNLMR2220
 2221 ALGMHETVME VMVNVLGGGG DSKEIRFPQM VTNCCRFLCY FCRISRQNQR SMFDHLSYLL2280
 2281 QNSGIGLGMR GSTPLDVAAA SCIDNNELAL ALQEQDLEMV VTYLAGCGLR MCPMLLSKGY2340
 2341 PDIGWNPGGG ERYLDFLRFA VFVNGESVEE NANVVVRLLI RRPECFGPAL RGEGGAGLLA2400
 2401 AIEEAIKISE DPARDGPTPK KDRRFMFGGE DQHEENRLHL GNAIMSFYSA LIDLLGRCAP2460
 2461 EMHLIQAGKG EALRIRAILR SLVPIEDLVG VISLPVQIPT FGKDGQIVEP KMSASFVPDH2520
 2521 KASMVLFLDR VYGIDNQDFL LHVLEVGFLP DMRASASLDT VAFSTTEMAL ALNRYLCSAV2580
 2581 LPLLTKCAPL FAGTDHRAIM IDSMLHTIYR LSRGRALTKA QRDVIEDCLM SLVKYLRPSM2640
 2641 LQHLLRRLVF DVPILNEYAK MPLKLLTNHY ERCWKYYCLP NGWANFGVTS EEELHLSRKL2700
 2701 FWGIFESLAH KKFDAELFKI AMPCICAIAG AIPPDYVDAS YSSMTEKKAS VDAEGNFDPK2760
 2761 PVETTNTIIP ERLDAFINKY AEHTHDKWAF EKIQNNWTYG EVLDENAKTH PMLRPYKTFS2820
 2821 EKDKEIYRWP IKESIKAMLA WEWTLEKARD GETEVKTEVK ATRKISQTAQ ATYDPSQGYS2880
 2881 PQPVDLIGMA LSRELQSMAE QLAENYHNTW GRKKKMELQA KGGGTHPLLV PYDTLTAKEK2940
 2941 ARDREKAQDL LKFLQLNGYA VTRGLKDMEQ EISSIEKRFA YGFLQKLLKW MEIAQEFIAH3000
 3001 LEAVVSSGRV EKSPHEQEIK FFAKILLPLI NQYFKNHCLY FLSTPAKVLG SGGHASNKEK3060
 3061 EMIASIFCKL AGLVRHRVSL FGTDASAVVN CLHILSRSLD ARTVMKSGPE IVKAGLRSFF3120
 3121 ESAADDIEKM VENLKLGKVS TKNQVKGVSQ NISYTTTALL PVLTSLFDHI AQHQFGDDVM3180
 3181 LDDLQISCYR IMCSIYSLGT VKTPHAENQR PALGECLAHL AAAMPVAFLE PNLNEFNSYS3240
 3241 VYTTKTPRER TILGLPSQVQ ELCLDIPELD VLMKEIGHLA ESGARYTEMP HVIEITLPML3300
 3301 CNYLPRWWER GPENFPEQEG CLCTDVTSEQ LNQLLGSIMK IVVNNLGIDE ASWMKRLAVF3360
 3361 AQPIVSRAKP EMLKSHFIPT MEKLKKRSGK VVAEEEQLRM EGKTEVDSEG GTIRDEFAVL3420
 3421 CRDLYALYPL LIRYVDNNRA RWLTCPDPDA EDLFRMVGEV FIFWSKSHNF KREEQNFVVM3480
 3481 NEINNMSFLT ADSKSKMSKA GDGEGGGSDD DRTKKKRRGD RYSVQTSLIV AALKKLLPIG3540
 3541 LNMCSPADQE LINLAKIRYS LKDTDEEVRE FLQNNLHLQG KVEDPSMRWQ MALYKETSGK3600
 3601 AEDADAPEKV VKRVQEVSAV LYHLELTEHP YKSKKMVWHK LLSKQRRRAV VACFRMTPLY3660
 3661 NIPRHRASNM FLDGYKRNWL ENEGYSFEDK MIDDLSKALE QEEEEEEETE SKPDPLHQLI3720
 3721 LHFSRTALTE KLKLEVDHLY MSYADIMAKS CHIGEEDEGG EEGGVEPSFE VRQTEMEKEM3780
 3781 EKQRLLYQQS RLHDRGAAEM VLQMISACKG ETGVMVSSTL KLGISILNGG NSDVQQRMLD3840
 3841 YLKDKKDVGF FLSLQALMQT CSVLDLNAFE RQNKAEGLGM VSEEGTKEKV MADDEFTCDL3900
 3901 FRFLQLLCEG HNNDFQNYLR TQTGSTTTIN IIICTVDFLL RLQESISDFY WYYSGKDIID3960
 3961 EPGKRNFSKA MTVAKQVFNS LTEYIQGPCT GNQQSLAHSR LWDAVVGFLH VFAHMMMKLA4020
 4021 QDSSQIGLLK ELLDLQKDMV VMLLSLLEGN VVNGTIARQM VDMLVESSSN VEMILKFFDM4080
 4081 FLKLKDIVAS DAFRDYVTDP RGLISKKDFS KAMDSQKQYT PSEIQFLLSC SEADENEMIN4140
 4141 FEEFANRFQE PAKDIGFNIA VLLTNLSEHV PHDTRLQNFL EQAESVLNYF RPFLGRIEIM4200
 4201 GASKRIERIY FEISEANRNQ WEMPQVRESK RQFIFDVVNE GGESEKMELF VNFCEDTIFE4260
 4261 MNIASQISEQ EEEVIEDEDE EEEEESGGGG GGEGEGEEGN GEEAPPESSS AFADFIKSIV4320
 4321 NFLSLFTFRN LRRRYRKIRK MTIKDMIVGL VMFLYTVLFG ILHFIYSVCK GFFLLIWNTL4380
 4381 FGGGLVEGAK KMTLTEILTN MPDPTQDEVH GDLPPEPGAR KVQEAGGAGE GEEGAGGGEE4440
 4441 EAEEGEEDED GRAGFGPHGG LGDMGETEPE EPPTPEGSPL LKRKLVSEEG GEGEVVVEEE4500
 4501 KVEEEPAPEP EKADAENGEK EKEAEPETED KQEEEQAEIA KAKAKAKKGK KEEEVGFELW4560
 4561 NELEIQRIKF MNYLSRNFYN LRFLALFIAF ALNFILLFYK VSDRLPGEEE EFEGSAMFEG4620
 4621 SGAFEGSAVF EGSAVFEGSG VFEGSGEAEG SGMEENGEED EENGFVYYFL EESTGYMEPA4680
 4681 MAFFSILHTI ISFLCIIGYN CLKVPLVIFK REKELARKLE FDGLYVTEQP EDDDIKGQWD4740
 4741 RLVLNTPSFP NNYWDKFVKR KVLEKYGDIY GRERIAELLG MDLASLDVSA MTHEKKRQPD4800
 4801 PSMFTWLTSI DIKYQIWKFG VVFTDNTFLY LVWYTVMSLL GHFNNFFFAC HLLDIAMGVK4860
 4861 TLRTILSSVT HNGKQLLMTV GLLAVVVYLY TVVAFNFFRK FYNMSEDEDE PDMKCDDMMT4920
 4921 CYLFHMYVGV RAGGGIGDEI EDPAGDEYEL YRVVFDITFF FFVIVILLAI IQGLIIDAFG4980
 4981 ELRDQQEQVR EDMETKCFIC GIGSDYFDST PHGFETHTME EHNLANYMFF LMYLINKDET5040
 5041 EHTGQESYVW KMYQERCWDF FPAGDCFRKQ YEDQLG

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