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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AOX1_TOBAC
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTRGATRMT RTVLGHMGPR YFSTAIFRND AGTGVMSGAA VFMHGVPANP SEKAVVTWVR  60
   61 HFPVMGSRSA MSMALNDKQH DKKAENGSAA ATGGGDGGDE KSVVSYWGVQ PSKVTKEDGT 120
  121 EWKWNCFRPW ETYKADLSID LTKHHAPTTF LDKFAYWTVK SLRYPTDIFF QRRYGCRAMM 180
  181 LETVAAVPGM VGGMLLHCKS LRRFEQSGGW IKTLLDEAEN ERMHLMTFME VAKPNWYERA 240
  241 LVFAVQGVFF NAYFVTYLLS PKLAHRIVGY LEEEAIHSYT EFLKELDKGN IENVPAPAIA 300
  301 IDYCRLPKDS TLLDVVLVVR ADEAHHRDVN HFASDIHYQG QQLKDSPAPI GYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle