YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTH2
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKMTVSSNY TIALWATFTA ISFAVGYQLG TSNASSTKKS SATLLRSKEM KEGKLHNDTD  60
   61 EEESESEDES DEDEDIESTS LNDIPGEVRM ALVIRQDLGM TKGKIAAQCC HAALSCFRHI 120
  121 ATNPARASYN PIMTQRWLNA GQAKITLKCP DKFTMDELYA KAISLGVNAA VIHDAGRTQI 180
  181 AAGSATVLGL GPAPKAVLDQ ITGDLKLY

Type	Start	End	Confidence
Cytoplasmic	1	9	0.61
Transmembrane Helix	10	30	0.70
Non-Cytoplasmic	31	208	0.90