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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMYH_SACDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRPFLLAYL VLSLLFNSAL GFPTALVPRG SSSSNITSSG PSSTPFSSAT ESFSTGTTVT  60
   61 PSSSKYPGSK TETSVSSTTE TTIVPTTTTT SVITPSTTTI TTTVCSTGTN SAGETTSGCS 120
  121 PKTITTTVPC STSPSETASE STTTSPTTPV TTVVSTTVVT TEYSTSTKQG GEITTTFVTK 180
  181 NIPTTYLTTI APTSSVTTVT NFTPTTITTT VCSTGTNSAG ETTSGCSPKT VTTTVPCSTG 240
  241 TGEYTTEATA PVTTAVTTTV VTTESSTGTN SAGKTTTSYT TKSVPTTYVF DFGKGILDQS 300
  301 CGGVFSNNGS SQVQLRDVVL MNGTVVYDSN GAWDSSALEE WLQRQKKVSI ERIFENIGPS 360
  361 AVYPSILPGV VIASPSQTHP DYFYQWIRDS ALTINSIVSH SADPAIETLL QYLNVSFHLQ 420
  421 RTNNTLGAGI GYTNDTVALG DPKWNVDNTA FTEPWGRPQN DGPALRSIAI LKIIDYIKQS 480
  481 GTDLGAKYPF QSTADIFDDI VRWDLRFIID HWNSSGFDLW EEVNGMHFFT LLVQLSAVDR 540
  541 SLSYFNASER SSPFVEELRQ TRRDISKFLV DPANGFINGK YNYIVETPMI ADTLRSGLDI 600
  601 STLLAANTVH DAPSASHLPF DINDPAVLNT LHHLMLHMRS IYPINDSSKN ATGIALGRYP 660
  661 EDVYDGYGVG EGNPWVLATC AASTTLYQLI YRHISEQHDL VVPMNNDCSN AFWSELVFSN 720
  721 LTTLGNDEGY LILEFNTPAF NQTIQKIFQL ADSFLVKLKA TWEQTGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle