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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMO_PICAN
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLRQIASQ ATAASAAPAR PAHPLDPLST AEIKAATNTV KSYFAGKKIS FNTVTLREPA  60
   61 RKAYIQWKEQ GGPLPPRLAY YVILEAGKPG VKEGLVDLAS LSVIETRALE TVQPILTVED 120
  121 LCSTEEVIRN DPAVIEQCVL SGIPANEMHK VYCDPWTIGY DERWGTGKRL QQALVYYRSD 180
  181 EDDSQYSHPL DFCPIVDTEE KKVIFIDIPN RRRKVSKHKH ANFYPKHMIE KVGAMRPEAP 240
  241 PINVTQPEGV SFKMTGNVME WSNFKFHIGF NYREGIVLSD VSYNDHGNVR PIFHRISLSE 300
  301 MIVPYGSPEF PHQRKHALDI GEYGAGYMTN PLSLGCDCKG VIHYLDAHFS DRAGDPITVK 360
  361 NAVCIHEEDD GLLFKHSDFR DNFATSLVTR ATKLVVSQIF TAANYEYCLY WVFMQDGAIR 420
  421 LDIRLTGILN TYILGDDEEA GPWGTRVYPN VNAHNHQHLF SLRIDPRIDG DGNSAAACDA 480
  481 KSSPYPLGSP ENMYGNAFYS EKTTFKTVKD SLTNYESATG RSWDIFNPNK VNPYSGKPPS 540
  541 YKLVSTQCPP LLAKEGSLVA KRAPWASHSV NVVPYKDNRL YPSGDHVPQW SGDGVRGMRE 600
  601 WIGDGSENID NTDILFFHTF GITHFPAPED FPLMPAEPIT LMLRPRHFFT ENPGLDIQPS 660
  661 YAMTTSEAKR AVHKETKDKT SRLAFEGSCC GK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle