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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|182407570, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.58
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLYCVLLL SAFEFTYMIN FGRGQNYWEH PYQNSNVYHP INEHREHPKE YQYPLHQEHT  60
   61 YQQEDSGEDE NTLQHAYPID HEGAEPAPQE QNLFSSIEIV ERSNYMGNPW TEYMAKYDIE 120
  121 EVHGSGIRVD LGEDAEVAGT QYRLPSGKCP VFGKGIIIEN SNTTFLKPVA TGNQDLKDGG 180
  181 FAFPPTEPLI SPMTLNGMRD FYKNNEYVKN LDELTLCSRH AGNMNPDKDE NSNYKYPAVY 240
  241 DDKDKKCHIL YIAAQENNGP RYCNKDESKR NSMFCFRPAK DKSFQNYTYL SKNVVDNWEK 300
  301 VCPRKNLENA KFGLWVDGNC EDIPHVNEFS ANDLFECNKL VFELSASDQP KQYEQHLTDY 360
  361 EKIKEGFKNK NASMIKSAFL PTGAFKADRY KSHGKGYNWG NYNRKTHKCE IFNVKPTCLI 420
  421 NNSSYIATTA LSHPIEVENN FPCSLYKNEI MKEIERESKR IKLNDNDDEG NKKIIAPRIF 480
  481 ISDDKDSLKC PCDPEMVSNS TCRFFVCKCV ERRAEVTSNN EVVVKEEYKD EYADIPEHKP 540
  541 TYDNMKIIIA SSAAVAVLAT ILMVYLYKRK GNAEKYDKMD QPQDYGKSTS RNDEMLDPEA 600
  601 SFWGEEKRAS HTTPVLMEKP YY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle