YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|153791529, gi...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRILFIMFP VNGLFGFVEA NQDCSSCYQM DIGVAVGIIT CDIILTLLIA LSVYCFVSRQ  60
   61 KKRGSLHAHG RCCSSGKAKL QQTSMRAKPI EVESPYQELY GVQSDIYSDL QQYRK

Type	Start	End	Confidence
Cytoplasmic	1	4	0.44
Transmembrane Helix	5	21	0.43
Non-Cytoplasmic	22	34	0.80
Transmembrane Helix	35	57	0.84
Cytoplasmic	58	115	0.87