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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCG8_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKTKEETQ LWNGTVLQDA SSLQDSVFSS ESDNSLYFTY SGQSNTLEVR DLTYQGGTCL  60
   61 RSWGQEDPHM SLGLSESVDM ASQVPWFEQL AQFKLPWRSR GSQDSWDLGI RNLSFKVRSG 120
  121 QMLAIIGSAG CGRATLLDVI TGRDHGGKMK SGQIWINGQP STPQLIQKCV AHVRQQDQLL 180
  181 PNLTVRETLT FIAQMRLPKT FSQAQRDKRV EDVIAELRLR QCANTRVGNT YVRGVSGGER 240
  241 RRVSIGVQLL WNPGILILDE PTSGLDSFTA HNLVRTLSRL AKGNRLVLIS LHQPRSDIFR 300
  301 LFDLVLLMTS GTPIYLGVAQ HMVQYFTSIG YPCPRYSNPA DFYVDLTSID RRSKEQEVAT 360
  361 MEKARLLAAL FLEKVQGFDD FLWKAEAKSL DTGTYAVSQT LTQDTNCGTA AELPGMIQQF 420
  421 TTLIRRQISN DFRDLPTLFI HGAEACLMSL IIGFLYYGHA DKPLSFMDMA ALLFMIGALI 480
  481 PFNVILDVVS KCHSERSLLY YELEDGLYTA GPYFFAKVLG ELPEHCAYVI IYGMPIYWLT 540
  541 NLRPGPELFL LHFMLLWLVV FCCRTMALAA SAMLPTFHMS SFCCNALYNS FYLTAGFMIN 600
  601 LNNLWIVPAW ISKMSFLRWC FSGLMQIQFN GHIYTTQIGN LTFSVPGDAM VTAMDLNSHP 660
  661 LYAIYLIVIG ISCGFLSLYY LSLKFIKQKS IQDW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle